Well guys, I found out the issue!
I took about 2 hours of checking the ground and every single wire in the harness for continuity or breaks in the connectors. I realized the CDI was getting power on its own side through its own connector and the ground continuity on the CDI side was good. Once I checked that I looked at the pulsar once again. When I tested it before for the 200 Microvolts pulsing I was checking it on the pulsar connector but never checked it on the connector that plugs into the CDI. Well there you have it, I wasn’t getting any pulse readings while cranking when checking this. So here we go, let’s take a closer look:
I read somewhere on the internets that people who bought an aftermarket pulsar had to switch the wires, well if you see my first post I tried that, but my problem was different. The connector on the pulsar had the wires coming in at the top and not the bottom where the push tab is See my pulsar pic – I am holding the aftermarket pulsar with wires the absent but are supposed to be at the top, on the right is the harness connector expecting wires on the bottom. WTF.. I ejected the wires from the connector and connected directly and cranked, FINALLY PULSE at coil!!! At this point I was ecstatic that I finally found the culprit!! Luckily I didn’t throw away the old connector from the pulsar and injected the wires on that instead.
But wait there’s more! Upon all of the troubleshooting I was testing it with original CDI, I had the new CDI I mounted on the bike, so I was well lets just use the new one since I got it. – NOPE! Same issue with CDI, The freaking connectors are backwards on these damn aftermarket parts! My second picture has the aftermarket CDI (which is kind of broken with one of the wires now) and the Original CDI as you can see the connectors are different. (The tab on the original is at the top but you cant see it in the picture)
So if anyone has these issues and have bought aftermarket, which lets face it - 80% off of genuine parts on these things! Check your connectors!